Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNVDGKI-VSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELVSKIKEL
1X25 Chain:A ((1-124))
METVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIEIAVICSK---
General information:
TITO was launched using:
RESULT:
Template:
1X25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42709 for 927 contacts (-46.1/contact) +
2D Compatibility (PS) -13493 + (NN) -6902 + (LL) 344
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -75460.0 ( -81.40 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_1X25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X25-query.scw
PDB file :
Tito_Scwrl_1X25.pdb
: