Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-----GGQMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTL--KSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMT-TSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA |
2WHD Chain:A ((33-343)) | -------VCIIGSGPAAHTAAIYAARAELKPVLFEGWMANDIAAGGQLTTTTDVENFPGFPTGIMGIDLMDNCRAQSVRFGTNILSETVTEVDFSARPFRVTSDSTTVLADTVVVATGAVARRLYFSGSDTYWNRGISACAVCDGAAPIFRNKPIAVIGGGDSAMEEGNFLTKYGSQVYIIHRRNTFRASKIMQARALSNPKIQVVWDSEVVEAYGGAGGGPLAGVKVKNLVTGEVSDLQVSGLFFAIGHEPATKFLNGQLELHADGYVATKPGSTHTSVEGVFAAGDVQDKKYRQAITAAGSGCMAALDAEHYLQEV---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157448 for 2571 contacts (-61.2/contact) +
2D Compatibility (PS) -31900 + (NN) -5756 + (LL) 656
1D Compatibility (HY) -21200 + (ID) 6050
Total energy: -221698.0 ( -86.23 by residue)
QMean score : 0.519
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