Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPGDADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLLP--YNVFFVPARGGLGENVVFQ--ANTIAASMAQQAGGYYTTMYVPDNVSETTYNTLLLEPSVINTLDKI-KQANVILHGIG---DALKMAHRRQSPEKVIEQLQHHQAVGEAFGYYFDTQGQIVH---KVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKIILE |
| 2W48 Chain:A ((4-315)) | -----SDDIRLIVKIAQLYYE-----------QDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAIN-------------------YDYNENLWLEQQLKQKFGLKEAVVAS----SEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYIN-CLVTNRETAELLLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156731 for 2388 contacts (-65.6/contact) +
2D Compatibility (PS) -31556 + (NN) -9480 + (LL) 2728
1D Compatibility (HY) -14000 + (ID) 2600
Total energy: -211639.0 ( -88.63 by residue)
QMean score : 0.408
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