Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFK-----LPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAA---RKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQK-------GEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSL-RTVDYVIVRNSIFNGDRD |
| 2C6Q Chain:B ((20-347)) | ---LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGY--PQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYAGGVAEYRASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137585 for 2752 contacts (-50.0/contact) +
2D Compatibility (PS) -33847 + (NN) -8672 + (LL) 56
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -203198.0 ( -73.84 by residue)
QMean score : 0.481
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