Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANF----NSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQISLADA--EKYLAEFDIVINTTPAGMAGNNESIIN---LK-HLSPNTLMSDIVYIPYKTPILEEAERKGNHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 3PHH Chain:A ((6-246)) | --FGVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLES-HIKSEFLHLG-LSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK-----YQNA--LILGAGGSAKALACELKK-QGLQVSVLNRS-----SRGLDFFQRLGCDCFMEPPKSAFDLIINATSASL--HNELPLNKEVLKGYFKEGKLAYDLAY-GFLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFS-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99809 for 1996 contacts (-50.0/contact) +
2D Compatibility (PS) -23557 + (NN) 419 + (LL) 3160
1D Compatibility (HY) -20000 + (ID) 4450
Total energy: -144237.0 ( -72.26 by residue)
QMean score : 0.369
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