Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVT-ILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
4BMX Chain:B ((25-251))
-IGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVAIQLVQHDVDLSAFDHPLGFIPESAIFIETSESLNALAKEVANEQHIVLKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISDNADEEANMSFDAFLEKSAQTSAKFLKSMVDEL
General information:
TITO was launched using:
RESULT:
Template:
4BMX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130407 for 2045 contacts (-63.8/contact) +
2D Compatibility (PS) -24638 + (NN) -11062 + (LL) 68
1D Compatibility (HY) -18400 + (ID) 4200
Total energy: -188639.0 ( -92.24 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_4BMX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BMX-query.scw
PDB file :
Tito_Scwrl_4BMX.pdb
: