Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAEQAKVWD-VDMVIKVKEPLESE-----YPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDR--SSPLLSPMSEVAGRMSAQVGA-EFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQ----------SDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL |
| 1PTJ Chain:B ((1-327)) | MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFP----MMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITVDDEAM--EFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG-----NCPLSEPGKIVVKHGVKIVGHTNVPSRV------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123975 for 2370 contacts (-52.3/contact) +
2D Compatibility (PS) -31813 + (NN) -8674 + (LL) 5016
1D Compatibility (HY) -17600 + (ID) 5450
Total energy: -182496.0 ( -77.00 by residue)
QMean score : 0.403
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