Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMG-GLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4JT9 Chain:A ((22-232)) | -------------ACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD-------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83675 for 1498 contacts (-55.9/contact) +
2D Compatibility (PS) -21789 + (NN) -7270 + (LL) 3124
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -131060.0 ( -87.49 by residue)
QMean score : 0.404
|
|
|