Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKIAFLAKELGIKICEINDVDHIDLAIDGADEVDP-SLNIIKGGGGALFREKVIDEMASRFVVVVDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVN--EDVAFITDNGNYILDCKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK
3IXQ Chain:A ((2-225))
--SNEDLKLKVAKEAVKLVKDGMVIGLGTGSTAALFIRELGNRIREEELTVFGIPTSFEAKMLAMQYEIPLVTLDE-YDVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFPIPVEVIPSAYRVVIRALSEMGGE-AVIRLGDRKRGPVITDNGNMIIDVFMN-IDDAIELEKEINNIPGVVENGIFTK-VDKVLVGTKKGVKTLK-
General information:
TITO was launched using:
RESULT:
Template:
3IXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141109 for 1944 contacts (-72.6/contact) +
2D Compatibility (PS) -24580 + (NN) -10613 + (LL) 864
1D Compatibility (HY) -18800 + (ID) 3950
Total energy: -198188.0 ( -101.95 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3IXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXQ-query.scw
PDB file :
Tito_Scwrl_3IXQ.pdb
: