Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRALETIATLREYRKSLKESVGFVPTMGALHRGHQSLIERSLK-ENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCEKSGVNAVFAPKIGEMYPYEAKQRLKLYAPAFLSHSLEGAVRKGHFDGVVQVVLRLFHLTNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSDNLALSSRNVCLNATERKQALAIPKALEKIQQAIDRGEKACEKLKKLGLEILKNLEVDYLECCNHKLEPLKTIEPANTL--VLVAARVGKTRLLDNLWV |
3IOD Chain:A ((35-286)) | --------------------VMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQF-----LDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQ---PGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDAAPGVAVDYLELRDIGLG--------NGSGRLLVAARLGTTRLLDNIAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131974 for 1945 contacts (-67.9/contact) +
2D Compatibility (PS) -25753 + (NN) -7925 + (LL) 2904
1D Compatibility (HY) -19200 + (ID) 5100
Total energy: -187048.0 ( -96.17 by residue)
QMean score : 0.458
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