Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKYHSDQEYEEIITDQLGDMQLRENLRSAMDTLRANRKNLLKNRYSEWENLRELGKEVKLKILSRLDEYLELFEKNATQNGFKIHYAKDGDEANEIIYNLAKEKNIKRILKQKSMASEEIGLNHYLKEKGIQAQETDLGELIIQLINEHPVHIVVPAIHKNRKQIGKIFEEKLNAAYEEEPEKLNAIARKHMRKEFESFKMGISGVNFAIANEGAIWLVENEGNGRMSTTACD-VHVAICGIEKLVESFDDAAILNNLLAPSAVGVPITCYQNIITGPRKNDDLDGPKETHIILLDNNRSNILADEKYYRALSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGVVVSPQLFGLNNYGHIPNLCSLCGRCTEVCPV------EIPLAELIRDLRSDKVGEG----RGVVKGAKST--QHSGMEKFSMKMFAKMASDGTKWRFQLKMAQFFSPLGKLLAPILPLVKEWASVRTLPNMDTSLHAKVQHLEGVIYE |
| 2V4J Chain:B ((2-381)) | -AFISSGYNPEKPMANRITDIGPRKFDEFFPPVIAKNFGSWLYHEILE--------------------------------PGVLMHVAESGDKVYTVRVGAARLMSITHIREMCDIADKYCGGHLRF---------TTRNNVEFMVADEASLKALKEDLASRKFDGG-------------------------------SLKFPIGGTGAGVSN-----IVHTQGWVHCHTPATDASGPVKAIMDEVFEDFQSMRL------PAPVRISLACCINMCGAVHCSD---------IGVVGIHRKPPMIDHEWTDQL-C-EIPLAVASCPT-AAVRPTKLEIGDKKVNTIAIKNER------------CMYCGNCYTMCPALPISDGEGDGVVIMVGGKVSNRISMPKFSKVVVAYIPNEPPRWPSLTKTIKHIIEVYSANAYKYE---RLGEWAERIG--WERFFSLTGLEFSHHLIDDFRDPAYYTWRQSTQFKF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118127 for 2691 contacts (-43.9/contact) +
2D Compatibility (PS) -37726 + (NN) -2031 + (LL) 8988
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -166596.0 ( -61.91 by residue)
QMean score : 0.232
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