Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFLNDHINVFGLIAALVILVLTIYESSSLIKEMRDSKSQGELMENGHLIDGIGEFANNVPVGWIASFMCVIVWAFWYFFFGYPLSSFSQIGQYNEEVKAHNQKFEAKWKHLGQKELVDMGQGIFLVHCSQCHGITADGLHGSAQNLLRWDKE--EGIMDTIKHGSKGMD-----YPAGEMPAIE--MDEKDAKAIASYVMAELSSVKKTKNPQLIDKGKELFE-------SMGCAGCHGNDGKGLQENQVFAADLTTYGTESFLRNILTHGKKG------NIGRMPSFKYKNFSDLQVKALVEFIKSLKPLED |
| 1M70 Chain:A ((2-190)) | -------------------------------------------------------------------------------------------------------------------GDAEAGQGKV-AVCGACHGVDGNSPAPNFPKLAGQGERYLLKQLQDIKAGSTPGAPEGVGRKVLEMTGMLDPLSDQDLEDIAAYFSS-QKGSVGYADPALAKQGEKLFRGGKLDQGMPACTGCHAPNGVGND--LAGFPKLGGQH-AAYTAKQLTDFREGNRTNDGDTMIMRGVA-AKLSNKDIEALSSYIQGLH---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21597 for 1275 contacts (-16.9/contact) +
2D Compatibility (PS) -17707 + (NN) -8254 + (LL) 9320
1D Compatibility (HY) -1600 + (ID) 1950
Total energy: -41788.0 ( -32.77 by residue)
QMean score : 0.308
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