Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNQASHLDNFMNAKNPKSFFDNKGNTKFIAITSGKGGVGKSNISANLAYSLYKKGYKVGVFDADIGLANLDVIFGVKTHKNILHALKGEA------KLQEIICEIEPGLCLIPGDSGEEILK--YISGAEALDRFVDEEGVLSSLDYIVIDTGAGIGA-TTQAFLNASDCVVIVTTPDPSAITDAYACIKINSK-----NKDELFLIANMVAQPKEGRATYERLFKVAKNNIASLELHYLGAIENSSLLKRYVRERKILRKIAPNDL---FSQSIDQIASLLVSKLETGTLEIPKEGLKSFFKRLLKYLG |
| 3FWY Chain:A ((47-295)) | -------------------------GAKVFAV-YGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDST-FTLTGSLVPTVIDVLKDVDFHPEELRPEDFVFEGFNGVMCVEAGGPPAGTGCGGYVV-GQTVKLLKQHHLLDDTDVVIFDVLGDVVCGGFAAPLQHADQAVVVTANDFDSIYAMNRIIAAVQAKSKNYKVRLAGCVANRSRATDEV-------DRFCKE----TNFRRLAHMPDLDAIRRSRLKKKTLFEMDEDQDVLAARAEYIRLAESLWRGLDPIDPHSLPDRDIFELLGFD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178230 for 2027 contacts (-87.9/contact) +
2D Compatibility (PS) -24610 + (NN) -4354 + (LL) 1920
1D Compatibility (HY) -6000 + (ID) 2100
Total energy: -213374.0 ( -105.27 by residue)
QMean score : 0.514
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