Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSHFCTEISEKDVGKTIKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSS---KAYEKALEVRSEFVLVAKGKARLRGAGLENPKLKTGKIEIVLEELVIENKS-ATPPIEI-GNKSVNEDLRLKYRYLDLRSLNAYEIFKLRSEVALITRNALAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQ-PEFTQIDAEMSFC-DEDDVMGVVEDLLQEIFKAI-GH-------------TISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFMDSSNSIFSNIAQDPKDKRIKALNVKGADAVFSRSVLKELEEFVRQFGAKGLAYLQIKEDGIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVHFPMFEKTENGYHAAHHPFTMPKNIECEDIEEIEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKININEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSNSIRDVIAFPKTQKASCLLTDAPSPINEEQLRELHIRLRKPI |
3NEM Chain:A ((2-436)) | YRTHYSSEITEELNGQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVNFTPK-------AKLGFEILPEKIVVLNRAETPLPLDPTGKVKAELDTRLDNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKY--FEEDAFLAQSPQLYKQIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILNFELEEPKLPFPRVSYDKALEILGDLGKEIPWG-----------------------------------------------------------------------------EDIDTE--------------------------GERLLGKY---MMEN------ENAPLYFLYQYPS----------EAKPFYIMKYDN----KPEICRAFDLEYRGVEISSGGQREHRHDILVEQIKEKGLNP----ESFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167650 for 3249 contacts (-51.6/contact) +
2D Compatibility (PS) -44483 + (NN) -18601 + (LL) 10844
1D Compatibility (HY) -28000 + (ID) 6550
Total energy: -254440.0 ( -78.31 by residue)
QMean score : 0.471
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