Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEHNGHDKLNGVLRGFLGDSFTLDGKEGGLNMSKMLEFIKK--------------EKPKMNVLLMGATGVGKSSLINALFGKEITKTGVGKPITQHLEKY--IDEEKGLILWDTKGIEDKDYHDTMQSIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRVQERERELLSFAKHWNIPTIVVFTHTQAEAGDAF-VQETKGIIDEEWGFKGFVRAYVRVNSVAFSFRGLKVPVEGLEELVDETKKCLSDAEKNKKRHFLSIQRVKIQERKQAMIEECKTIIHVASGAAGVAGLIPIPFSDALAIAPIQAGMIYKMNDAFGMDLDKSVGASLVAGLLGVTAVAQVGRTLVNGFLKFIPVVGSVAGGATAAVITEGIGFAYLKVLEKCFNDETGEVNLPGEVGMITSLFKENYLNLDTIKKLKP
1MKY Chain:A ((140-355))-----------------GEPIPVSAE-HNINLDTMLETIIKKLEEKGLDLESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIP------VDDEVFIDGRKYVFVDTAGL------------EKYSNY--RVVDSIEKADVVVIVLDATQ-GITRQDQRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDY-SPLIFTSAD----KG-----WNIDRMIDAMNLAYASYTTKVPSSAINSALQKVLAFTNLPRGLKIFFGVQVDIKPPTFLFFVNSIEKVKNPQKIFLRKLIRDYVFPFEGSPIFLKFKRSR-----------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58481 for 1346 contacts (-43.4/contact) +
2D Compatibility (PS) -20144 + (NN) -9697 + (LL) 10108
1D Compatibility (HY) -13200 + (ID) 1750
Total energy: -93164.0 ( -69.22 by residue)
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_1MKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MKY-query.scw
PDB file : Tito_Scwrl_1MKY.pdb: