Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKIL--DQKHTEVCFNSAWLDALGAKGMIELCAKFSVARMLERDDFAKRYKENRPISIVEFLYPLLQGYDSVAMGADIELGGNDQKFNLLVGRFLQRAYGLNKEQSIITMPLLEGLDGVQKMSKSLGNYVGITEEPNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLL----------------------------PEILLESDFDEG--VGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGN-YVIQLGKKRFMKLNIN- |
| 1H3F Chain:A ((5-432)) | -GHTPEEALALLKRGAEEIVP----EEELLAKLKEGRPLTVKLGADPTRPDLHLGHAVVLRKMRQFQELGHKVVLIIGDFT---------------------RENAKTYVAQAGKILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEAGIPISLHELLYPFAQAYDSVAIRADVEMGGTDQRFNLLVGREVQRAYG-QSPQVCFLMPLLVGLDGREKMSKSLDNYIGLTEPPEAMFKKLMRVPDPLLPSYFRLLTDLEEEEIEALLKA------GPVPAHRVLARLLTAAYALPQIPPRIDRAFYESLGYAWEAFGRDKEAGPEEVRRAEARYDEVAKEEIPEVTIPASELKEGRIWVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPRILQRGKDRFVRVRLSD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151066 for 2796 contacts (-54.0/contact) +
2D Compatibility (PS) -40089 + (NN) -17745 + (LL) 2556
1D Compatibility (HY) -29200 + (ID) 7800
Total energy: -243344.0 ( -87.03 by residue)
QMean score : 0.543
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