Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MGILTFMDFCSGIGGGRLGLERCHLKCVGHAEINHEAIRTYELFFKDTHNFGDLMRINPNDLPNFDVLVSGFPCQAFSINGKRKGLEDERGTIIYGLIRILKVKQPKCFLLENVKGLIHHKQQETFKTIIKALQEAGYTTHYQILNSADFQLAQKRERLYIVGFRKDLKRP-FNFPLGLANDYCFKDFLDADNECYLDVSNATFQRYLRNPYNHNRVFLEDILTLENAVL--------------------DTRQSDLRLYFNVFPTLRTSRHGLFYTQKGKIKRLNAVESLLLQGFPRDLIAKIKNNPNFKESHLLSQAGNAMSVNVIAAIAKQMLKAFNNE-- |
6MHT Chain:A ((1-327)) | MIEIKDKQLTGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFG-EKPEGDITQVNEKTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHDNGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQKRERIYMICFRNDLNIQNFQFPKPFELNTFVKDLLLPDSEVEHLVIDRKDLVMTNQEIEQTTPKTVRLGIVGKGGQGERIYSTRGIAITLSAYGGGIFAKTGGYLVN---------------GK---TRKLHPRECARVMGYPDSYKVH-PS-----TSQAYKQFGNSVVINVLQYIAYNIGSSLNFKPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 6MHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152595 for 2220 contacts (-68.7/contact) +
2D Compatibility (PS) -31199 + (NN) -10448 + (LL) 808
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -216834.0 ( -97.67 by residue)
QMean score : 0.433
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