Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTNGLFKMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKV--VDFANPYMKVALGVIS---KDGVIKNIEELKDKELIVNKGTTADFYFTKNYPNIKL----LKFEQNTETFLALLNNKAIALAHDNTLLLAWVKQ--HPEFKLGITSLGDKDVIAPAIKKGNPKLLEWLNNEIDSLISSDFLKEAYQETLEPIYGDGIKPEEIIFE---------------------------------------------------------------- |
4Z9N Chain:A ((9-328)) | -------------------------------ADTLSDVKAKGFLQCGVNTGLLGFASPNDKGEWSGFDVDYCRAVASAIFGDPTKVKFTPLNAKERFTALQSGEVDVLIRNTTWTISRDTSLGLDFAGINYYDGQGFMINSKKLAGINSALQLSGASICVQAGTTTELNMADYFRANKMEYNPVVFEKIEEANAAYDSGRCDAYTTDQSSLYGVRLALANPDDHVILPEIISKEPFGLTVRQGDARWADVVRWTHNALLNAEEYG-ITQANVEEMKKSDNPDIKRLLGAEADTKIGTDLGLDKDWVVKIIKGVGNYGEIFERNIGSGSPLKIARGLNAQWNKGGLQYGIPVR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4Z9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85263 for 1926 contacts (-44.3/contact) +
2D Compatibility (PS) -26089 + (NN) -10011 + (LL) 2704
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -132559.0 ( -68.83 by residue)
QMean score : 0.415
|
|
|