Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQSHQNLQSQFFIEHILQILPHRYPMLLVDRIIELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQTGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAERE
3D04 Chain:F ((11-158))
----------QFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAER-
General information:
TITO was launched using:
RESULT:
Template:
3D04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115263 for 1136 contacts (-101.5/contact) +
2D Compatibility (PS) -15519 + (NN) -2325 + (LL) 860
1D Compatibility (HY) -24000 + (ID) 7300
Total energy: -163547.0 ( -143.97 by residue)
QMean score : 0.499
(partial model without unconserved sides chains):
PDB file :
Tito_3D04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D04-query.scw
PDB file :
Tito_Scwrl_3D04.pdb
: