Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETSSHFLKSFRLKRYIGFLLISLALLITPFVRIDGAHLFLISFEHKQLHFLGKIFSAEELQILPFMVILLFIGIFFITTSLGRVWCGWACPQTFLRVLYRDVIETKIFKLHKKISNKQESPKNTPSYKIRKALSVLLFAPVVAGLMMLFFFYFIAPEDFFMYLKNPSDHPIAMGFWLFSALVVLFDIVVVAERFCIYLCPYARVQSVLYDNDTLNPIYDEKRGGVLYDNQGRLFPLPPKKRSAENECVNCLHCVQVCPTHIDIRKGLQLECINCLECVDACTITMAKYNRPSLIQWSSTNAINTRQKVRLVRLKTIAYMGVIAVVVALLIITSFKKERMLLDINRNSDLYEIRSSGYVDNDYVFL----FHNTDNKDHEFYFKILGQKDIQIKKPLNPIAIKAGQKIKAVVILRKPLKGNATEYKHAKDALIPITIQAYSVDDKNITIERESVFIVPSED |
2HJQ Chain:A ((1-111)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFTAKLIKGKTYNVMGITFRAGVSQTV----PKKLYEYLNENPYFILTQELNNQKDDPINYTESELKGMNKAEHESIISNLGR---------NPSDFKNADERIAYILKQIDNKGELEHHHHHH-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44944 for 630 contacts (-71.3/contact) +
2D Compatibility (PS) -11279 + (NN) -3678 + (LL) 28432
1D Compatibility (HY) 0 + (ID) 950
Total energy: -32419.0 ( -51.46 by residue)
QMean score : 0.331
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