Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLVTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEA-IALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLHFEEHGEVCPAGWRKGDKGMKATHQGVAEYLKENSIKL
3TJF Chain:C ((64-250))
--ISKPAPYWEGTAVI-DGEFKE-LKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSETIIPDPAGKLKYFDK-----
General information:
TITO was launched using:
RESULT:
Template:
3TJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100714 for 1402 contacts (-71.8/contact) +
2D Compatibility (PS) -19693 + (NN) -3175 + (LL) 348
1D Compatibility (HY) -18000 + (ID) 4050
Total energy: -145284.0 ( -103.63 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3TJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TJF-query.scw
PDB file :
Tito_Scwrl_3TJF.pdb
: