Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKRMKCFSQKWLVFFVTHWLLLASLSHAKMAFESNIDTKALEAFGVNASFLSQMPGALKKVNKEEEWKKLVKRFDVNYQFIPIIKNMLIGASVPQEFLF-LAMAESKFSSRA-YSRKKAVGIWQFMPSTAKEL----GLKVNHYIDERRDPIKSTQAAIAYLKRLYKQTGEWYLVAMAYNYGLRKVQNAIKAAGTSDIKVLLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGARVSLVGVPFKRHTSLVQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFKQRQLKQNKNAQANPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIHQRLIIPTNKKLLATREF |
| 3W6B Chain:A ((46-180)) | ---------------------------------------------------------------------------------VMNADNAYGKGGDFALLLSAVIKKESYFGDGLSGSPSAGDGLMQVEPNTRNAYLSQFSAK-YGHAYNHSSEQDQVYMGSLILNEKIVRFGSIYSGLLHYNGGDYWYPGAT----DS----------YGRPILADQYANTVYAQYKSYGGRYSR-------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46969 for 945 contacts (-49.7/contact) +
2D Compatibility (PS) -13424 + (NN) -3355 + (LL) 18712
1D Compatibility (HY) 2000 + (ID) 1050
Total energy: -44086.0 ( -46.65 by residue)
QMean score : 0.479
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