Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAV--PR-FPLSELEAVLADEELYLAFSEWFSEAFLDVLKK----YPNDRFAINIAPQQLF--YIET-LHWLD---KLKSESHRITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVMSYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLESHGVSIFQGYLVNKPFPV
2BAS Chain:A ((34-262))
-NIDDVLPYYQAIFSAEEQKVVGYEVLGRIL-ADSEIQSLGPFFLDAGIP----EEYKLEVDNRIIRQALDRFLEADSDLLIFMNQDANLLMLDHGESFLELLKEYEAKGIELHRFVLEITEHNFE--------GDI---EQLYHMLAYYRTYGIKIAVDNIGKESSNLDRIALLSPDLLKIDLQALK----S-PSYEHVLYSISLLARKIGAALLYEDIEANFQLQYAWRNGGRYFQGYYLVSPSE-
General information:
TITO was launched using:
RESULT:
Template:
2BAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133070 for 1554 contacts (-85.6/contact) +
2D Compatibility (PS) -22535 + (NN) -10168 + (LL) 1392
1D Compatibility (HY) -11200 + (ID) 2100
Total energy: -177681.0 ( -114.34 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2BAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BAS-query.scw
PDB file :
Tito_Scwrl_2BAS.pdb
: