Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQT-DFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLAL----ATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFN-QKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDIIGAKQTLNFDSIKAFHGTYSAD-------RVFTAGAPISSTNFSATSDGFSVALGNL-TDSVQISYTTTTTDGGK-STQYDNTAKL--AGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAK-----TKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEF-------TIGENNQAITVT----KENTLNTGSVELTKLDAATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTDLKTDENGVLKVTDLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK |
3IRP Chain:X ((2-419)) | ------------------------------AQSGRNVNHLVFANTSYEILGGGKKYNQVFMTMDGKLKIKIDYTVDDSVVEGDYFTVDFGKYIHPGTSRKPYRVNNIHDANGRTIAIGSYDSATNTAKYTFTNYVDIYNNVRGSFSLLSWPFKELVTTDKQSVPVGITVAGEDYTQNVIFNYGNRTVP-----VISDINYLTKDFAEFTTYINQNRAFNTGSKVRLSGQGFKFTSPDEIEVYKVLNNSQFRDSFSPDYANLTQVRNPKIIINSDGSATVDLGDIGTLGYIIRSKPNTLPDFSGIGVLKSEYTFTNNKNQRDTRAHASSIQFVRAELAGFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLAT-TTTDITGHYNFDNLTNGNY-LVEFVMPEGYIPTQANSTVDDKDSDVVFENGRYIAHVTIKDADNMTIDAGLVSD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IRP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56779 for 2911 contacts (-19.5/contact) +
2D Compatibility (PS) -41761 + (NN) -16714 + (LL) 21268
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -105436.0 ( -36.22 by residue)
QMean score : 0.353
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