Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQN-AVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPS---SAITQTTDGFKVDLGNLTD---SVKISYYTTSTDNGAS-PNYTNKGQLT------GDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGAGATVQTGLKTNADGKLAISNLKYDTYQLIETKAPQGYVLDASPVKFTIDDTHQSLFVSKENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGNTLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
2Z1P Chain:A ((31-325)) | ------------------------------------------SELSKSSIVDKVELDHTTLYQGEMTSIKVSFSDKEN-QKKPGDTITLTLPDALVGMTENDSSPRKINLNGLGEVFIYK--DHVVATFNEKVESNVNGHFSFGIKTLITNS-----SPNVIETDFGTATATQRLTIEGVR---DYPFFYKVGDLAG-ESNQVRWFLNVNLNKSDVTEDISIADRQGSGQQLNKESFTFDIVNDKETKYISLAEFEQQGYGKIDFVTDNDFNLRFYRDKARFTSFIVRYTSTITEAGQHQATFENSYDINYQLNNQDATNEKNTSQVKNVFVEGEA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16492 for 1960 contacts (-8.4/contact) +
2D Compatibility (PS) -29853 + (NN) -17576 + (LL) 17012
1D Compatibility (HY) -5200 + (ID) 2650
Total energy: -54759.0 ( -27.94 by residue)
QMean score : 0.323
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