Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARP-IIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTVPEVADRFIGAYFDDVDQLNVAKASVNPRVT--ENMDEIIQMISTLIEKGYAYESAGDVYFQTKKF------------KDYGKL---------SGQE--------LSELQHGARVEYNERK--------------------QDEL----DFTLWKAA-KPG-EIFWESPFGNGRPGWHIE------------CSALA----------------KKYLGD----TIDIHAGGQDLVFPHHEDEIAQSEAAT---------GKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDNDPNVIRFFMLSV-HYRKPITLNDAILEDAKN--GLERLMIAYQNIDHRIQTDDGE-----YVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVS------INVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG |
| 1RQG Chain:A ((2-523)) | ---------------------VRYMVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKITFQRAKISFDF-FGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQAYCEHDKMFLPDRFVIGTCPYCGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISFRDSAHYYIKMQDFAERLKRWIEKQPWKPNVKNMVLSWIEEGLEERAITRDLNWGIPVPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKDNIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEFLDVFPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFVNRYFDGVVPERGELDELDREALEEIEKAFKEVGELI-MNYRFKDALKRVMSLASFGNRYFDHKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPF--LPDASEKIWHLLNLDE------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RQG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120002 for 3050 contacts (-39.3/contact) +
2D Compatibility (PS) -43614 + (NN) -13873 + (LL) 4560
1D Compatibility (HY) -4000 + (ID) 3050
Total energy: -179979.0 ( -59.01 by residue)
QMean score : 0.399
|
|
|