Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSDGSNYKETDAAGKVSLDLDIDAEGNVKELYI-DDAVAITNSYKLKKKG-DDEYQYDGTLISKKVYSYETESDKENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQSGKLIFKKVDTKEKVLIKETYKKN |
| 2LN3 Chain:A ((1-83)) | -----------------------------------------------------------------MGLTRTITSQNKEELLEIALKFISQGLDLEVEFDST----------DDKEIEEFERDMEDLAKKTGVQIQKQWQ-GNKLRIRLKGSLEHHHHHH--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23947 for 527 contacts (45.4/contact) +
2D Compatibility (PS) -8780 + (NN) -3203 + (LL) 6876
1D Compatibility (HY) -1600 + (ID) 900
Total energy: 16340.0 ( 31.01 by residue)
QMean score : 0.331
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