Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDWKIKIQTFLSKNYGFFVLAVILYWLKTYIAYQLEFKLGIENLMQQILLFINPLSGAIFFMGLALFAKGRRSFIWIIVIDFLMSFILYANIVYYRFFSDFITLPNLNAKQMQNMGDMGSSITALLSWHDIIYFADIIILIALLAFRFVKPNKTARIRARKVVGVLTLGIAMFFGNLGLAEIDRPQLLTRTFDRNYIVKYLGMTNYQIYDAVKSTESSTQRALADSSDVTEVLNYTKSKYAAPNPEYFGKAKGKNVIYIHLESFQQFLVNYKLNGEEVTPFINSFFKDQNT---LSFTNFFHQTGQGKTADSEMLLENSLYGLPQGSAFTTKGQNTYESASAILG-QQGYTSAVFHGNYKSFWNRDEIYKQFGYDNFFDASYYDMNEADVSNYGLKDKPFFKESEEYLSSLQQPFYTKFITLTNHFPYPIDEKD-ASIAPATTGDSSVDTYFQTARYLDESVKSFVDYLKKSGLYDNSVIIMYGDHYGISDNHEEAMTKILGKDYN--TFENAQAQRVPLMIHVPGVQGGVQEQYGGQVDLLPTLLHLLGVDNKEYLQFGTDLLSKDHKQLVPFRNGDYITPTYSMIGGNMYNQQTGEPIATETKEMKETKEKVAKELELSDSVLQGDLLRFYAPDGFKKVDPSKYNYNKKKSTDSSDK |
| 2W5Q Chain:A ((4-421)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSS--GKEQFTYFPNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMHGDYKTFWNRDQVYKHFGIDKFYDATYYDMSDKNVVNLGLKDKIFFKDSANYQAKMKSPFYSHLITLTNHYPFTL-DEKDATIEKSNTGDATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYGISENHNNAMEKLLGEKITPAKFTD-L-NRTGFWIKIPGKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGDFITKDYKYVNGKIYSNKNNELITTQPADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYET--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -125370 for 3629 contacts (-34.5/contact) +
2D Compatibility (PS) -44918 + (NN) -30742 + (LL) 21044
1D Compatibility (HY) -46800 + (ID) 11700
Total energy: -238486.0 ( -65.72 by residue)
QMean score : 0.520
|
|
|