Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFV----IGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNF--IVSDFDRAAPNGT-GAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIEEVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK
1A3G Chain:A ((4-307))-------------------KADYIWFNGEM---VRWEDAKVHVM--SHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAK---IYRFPVSQSIDELMEACRD----VIRKNNLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAF--PW----------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITP---VRSVDGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN


General information:
TITO was launched using:
RESULT:

Template: 1A3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106183 for 2335 contacts (-45.5/contact) +
2D Compatibility (PS) -30401 + (NN) -9031 + (LL) 1284
1D Compatibility (HY) -16400 + (ID) 4950
Total energy: -165681.0 ( -70.96 by residue)
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_1A3G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1A3G-query.scw
PDB file : Tito_Scwrl_1A3G.pdb: