Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSV-LIEEDAFETEIKKLMDS----GVRGFNITTPFKERILPFLDELDNLAAASGAVNTV-LKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNN---HHAITLEEA---EKQLADFTIIIQTTSIGLEASKNKSPISLANVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 2NLO Chain:A ((28-300)) | -----LIGQGLDLSRTPAMHEAEGLAQGRATVYRRIDTLGSRASGQDLKTLLDAALYLGFNGLNITHPYKQAVLPLLDEVSEQATQLGAVNTVVIDATGHTTGHNTDVSGFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGMPAHPGTA-FDVSCLTKDHWVGDVVYMPIETELLKAARALGCETLDGTRMAIHQAVDAFRLFTGLEPDVSRMRETFL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101061 for 2242 contacts (-45.1/contact) +
2D Compatibility (PS) -28053 + (NN) -10679 + (LL) 464
1D Compatibility (HY) -12800 + (ID) 4300
Total energy: -156429.0 ( -69.77 by residue)
QMean score : 0.488
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