Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2XUL Chain:D ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQ--------YTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
2XUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51810 for 683 contacts (-75.9/contact) +
2D Compatibility (PS) -11567 + (NN) -6704 + (LL) 632
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -76949.0 ( -112.66 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_2XUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XUL-query.scw
PDB file :
Tito_Scwrl_2XUL.pdb
: