Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSL-------YQDISQVETKALQHLQRV---------DEQLGSHTIDIEPTSELAKHHPNKKLVNSLHH------QFIKKLA-PSFKVTARTAD-GMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK-- |
| 1S1M Chain:A ((1-544)) | MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVG-KYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGV--EILKGLDAILVPGGFGYRG------------------VEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVETMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHP-WFVACQFHPEFTSTPR-DGHPLFAGFVKAASEFQKRQA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81874 for 1917 contacts (-42.7/contact) +
2D Compatibility (PS) -23028 + (NN) -2530 + (LL) 1092
1D Compatibility (HY) -11600 + (ID) 2000
Total energy: -119940.0 ( -62.57 by residue)
QMean score : 0.306
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