Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIQGLTIAYKQ-KVAIDNVTLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPREQGQVTLADKPLT-------YWRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGLIKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEPFAGIDMTSEALIMRLLKKLRD-NGKTIVVVHHDFHKVAAYFDDIILL-NKKLVAHGPVEQTFTEEKIQFAYGDAPVAFAAGV
3GFO Chain:A ((8-239))LKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDN-QLFSASVYQDVSFGAVNMK----LPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVIR-------------


General information:
TITO was launched using:
RESULT:

Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169185 for 1757 contacts (-96.3/contact) +
2D Compatibility (PS) -23764 + (NN) -9710 + (LL) 964
1D Compatibility (HY) -16000 + (ID) 3050
Total energy: -220745.0 ( -125.64 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_3GFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GFO-query.scw
PDB file : Tito_Scwrl_3GFO.pdb: