Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATVEFEKGQVMEDALIDAVEEAGYEVA-----
2KYZ Chain:A ((1-67))
-MRYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETEN----LDSVLKKLEEIDYPVESYQEV
General information:
TITO was launched using:
RESULT:
Template:
2KYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41341 for 409 contacts (-101.1/contact) +
2D Compatibility (PS) -6835 + (NN) -839 + (LL) 476
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -56139.0 ( -137.26 by residue)
QMean score : 0.710
(partial model without unconserved sides chains):
PDB file :
Tito_2KYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYZ-query.scw
PDB file :
Tito_Scwrl_2KYZ.pdb
: