Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQLIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKEAVK
2IIE Chain:A ((133-192))
-------------------------------SRVENAGGGERIEIRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRAN
General information:
TITO was launched using:
RESULT:
Template:
2IIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15219 for 297 contacts (51.2/contact) +
2D Compatibility (PS) -5930 + (NN) 4866 + (LL) 2820
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: 13475.0 ( 45.37 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_2IIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IIE-query.scw
PDB file :
Tito_Scwrl_2IIE.pdb
: