Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLII---GGDPNKRGVVATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEPLSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKKPAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL--HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEERLIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLIESYTGQDSIRLIGLTVTNLKPVYFENLRLEGL
2V9W Chain:B ((9-285))------VLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYREAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSI-EFDKLKGMIGEAKAKYLISLARDEYNEPIR-TRVRKSIGRIVTMKRN---SRNLEEIKPYLFRAIEESYYKLDKR-------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2V9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119424 for 1989 contacts (-60.0/contact) +
2D Compatibility (PS) -29600 + (NN) -15093 + (LL) 6232
1D Compatibility (HY) -20800 + (ID) 4800
Total energy: -183485.0 ( -92.25 by residue)
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2V9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2V9W-query.scw
PDB file : Tito_Scwrl_2V9W.pdb: