Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTND-YSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLK-AEIKVVQLKGGVSHSDVNTYAAETLA-LFGAAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTVRDEALLFRLGYF-SDQEKARLKEKAVGDICSRFFTIDGEIADEKMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 2GNP Chain:A ((9-263)) | ------------------------------------------------------------MFKLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLIDDNMKIGFSWGKSLSNLVDLIHSKSVRNVHFYPLAGGPSHI-HAKYHVNTLIYEMSRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSNKGKHQWLDMLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLVNHLITDKNTILKVLEED--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147545 for 2098 contacts (-70.3/contact) +
2D Compatibility (PS) -27775 + (NN) -9980 + (LL) 4824
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -199726.0 ( -95.20 by residue)
QMean score : 0.554
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