Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCPECGQYDGKDVANS
2D74 Chain:A ((58-78))
--------------------------IRRCSNCGRYSTS-PICPYCGH---------
General information:
TITO was launched using:
RESULT:
Template:
2D74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -820 for 100 contacts (-8.2/contact) +
2D Compatibility (PS) -2223 + (NN) -1888 + (LL) 2076
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -5805.0 ( -58.05 by residue)
QMean score : 0.824
(partial model without unconserved sides chains):
PDB file :
Tito_2D74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D74-query.scw
PDB file :
Tito_Scwrl_2D74.pdb
: