Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQK--ADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGDDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAEFGSFFIGNLLLSEQLSKLFTI |
2VXH Chain:A ((11-251)) | KIERGTILTQPGVFGVFTMFKLR-PDWNKVPAMERKGAAEEVKKLIEKHK-----DNVLVDLYLTRGLETNSDFFFRINAYDLAKAQTFMREFRSTTIGKNADVFETLVGVTKPLNYISK----DKSPGLNAGLSSATYSG-PAPRYVIVIPVKKN----AEWWNMSPEERLKEMEVHTTPTLAYLVNVKRKLYHSTGLDDTDFITYFETDDLTAFNNLMLSLAQTTLGTIH------------SPEDVIKALAD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67487 for 1664 contacts (-40.6/contact) +
2D Compatibility (PS) -24082 + (NN) -8547 + (LL) 1744
1D Compatibility (HY) -4400 + (ID) 1900
Total energy: -104672.0 ( -62.90 by residue)
QMean score : 0.438
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