Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIWLKKIREENGLTQQDVAELADVERTTYASIEQG-RRNPSVVNAMRIASVLDFEWTIFFDDKVREKSHFYLNEKQEARK
3ZKC Chain:A ((6-62))
----IKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLL--------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24691 for 350 contacts (-70.5/contact) +
2D Compatibility (PS) -6023 + (NN) -1002 + (LL) 2076
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -34890.0 ( -99.69 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZKC-query.scw
PDB file :
Tito_Scwrl_3ZKC.pdb
: