Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTETAEKVEYIIETKDVDLFYGSKQA--LQKIALNIKKNQVTALIGPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQANPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHD-----------RLDRSAIGMSGGQQQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQASRISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG |
2HYD Chain:A ((340-555)) | ------------IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDV-----TSGQILIDGHNIKDFLTG--SLRNQIGLVQQDNILFSDTVKENILLG------RPTATDEEVVE-----AAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITH-ADKIVVIENGHIVE------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99805 for 1588 contacts (-62.8/contact) +
2D Compatibility (PS) -21997 + (NN) -9262 + (LL) 4024
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -143890.0 ( -90.61 by residue)
QMean score : 0.465
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