Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASS----GLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWPK--------------------QDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRL--RTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRG----------GVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI |
| 4JII Chain:X ((9-302)) | ----------LSTKAKMPIVGLGTWK-SPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATILSFNRNWRACN----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103037 for 2185 contacts (-47.2/contact) +
2D Compatibility (PS) -28019 + (NN) -11762 + (LL) 1848
1D Compatibility (HY) -22400 + (ID) 4950
Total energy: -168320.0 ( -77.03 by residue)
QMean score : 0.517
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