Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNTILKDTLSKGLFTAHQKVLIAVSGGIDSINLLQFLYQYQKELSISIGIAHINHGQRKESEKEEEYIRQWGQIHDV---PVFISYFQGIFSEDRARNHRYNFFSKVMREEGYTALVTAHHADDQAETVFMRILRGSRLRYLSGIKQVSAFANGQLIRPFLPYKKELLPNIFHFEDASNASSDYLRNRIRNVYFPALERENNQLKDSLITLSEETECLFTALTDLTRSIEVTNCYDFLRQTHSVQEFLLQDYISKFPDLQVSKEQFRVILKLIRTKANIDYTIKSGYFLHKDYESFHITKIHPKTDSFKVEKRLELHNIQIFSQYLFSYGKFISQADITIPIYDTSPIILRRRKEGDRIFLGNHTKKIRRLFIDEKITLKEREEAVIGEQNKELIFVIVAGRTYLRKPSEHDIMKGKLYIENLEKR-- |
2DER Chain:A ((17-380)) | -----------------AKKVIVGMSGGVDS-SVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNF--------AAEYWDNVFELFLAEYKAGR--TPNPDILCNKEIKFKAFLEFAAEDLG----ADYIATGHYV------RRADVDGKSRLLRGLDSNKD------QSYFLYTLS--HEQIAQSLFPVGELE---KPQVRKIAEDLGLVKFREFLGRYLPAQPGKIIT-----VDGDEIGEHQGLMYHTLGQRKGLGIGGTKE----GTEEPWYVVDKDVENNILVVAQGHE-HPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDR--------IEVIFDEPVAAVTPGQ----SAVFYNGEVCL----------GGGIIEQRLPLPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52518 for 2796 contacts (-18.8/contact) +
2D Compatibility (PS) -35346 + (NN) 4318 + (LL) 6556
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -89840.0 ( -32.13 by residue)
QMean score : 0.180
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