Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLEKRFNKYLDRIEVSLIRQFDQSISDIPGMVKLTLGEPDFTTPDHVKEAAKSAIDA-N-QSYYTGMSGLLALRQAAADFAKDKYNLTYN-PDCEILVTIGATEALSASLIAILEAGDVVLLPAPAYPGYEPIVNLVGADIVEIDTRE----------NDFRLTPEMLETAIIQQGEKLKAVLLNYPTNPTGITYSRQEIASLAEVLKKYDIFVISDEVYSELTYTGQQHVSIAEY--LPNQTILINGLSKSHAMTGWRVGLVYAPEAFIAQIIKSHQYMVTAASTISQFAGVEALSV-------GKNDTLPMRQGYIKRRDYIIDKMSKLGFKIIKPSGAFYIFAKIPDSYP---------QDSFKFCQDFAYQQAVAIIPGVAFGKY-----GEGYIRLSYAASMEVIETAMARLKVFMESYEG |
| 3E2Y Chain:A ((20-409)) | --------------------------AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMN-QYTRGFGHPALVKALSCLYGKIYQRQIDPNE-EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFS-S--KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAWN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249780 for 3083 contacts (-81.0/contact) +
2D Compatibility (PS) -39093 + (NN) -20235 + (LL) 3096
1D Compatibility (HY) -20000 + (ID) 5450
Total energy: -331462.0 ( -107.51 by residue)
QMean score : 0.546
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