Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQKVHPIGMRVGIIRDWDAKWYA-EKEYADYLHEDLAIRKFINKELADASVSTIEIERAVNKVIVSLHTAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENIARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTKGGK
2UUB Chain:C ((2-208))
-GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALARTTYGVLGVKAYIFLGEVI----------
General information:
TITO was launched using:
RESULT:
Template:
2UUB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81359 for 1765 contacts (-46.1/contact) +
2D Compatibility (PS) -21739 + (NN) -5070 + (LL) 132
1D Compatibility (HY) -18400 + (ID) 5550
Total energy: -131986.0 ( -74.78 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_2UUB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UUB-query.scw
PDB file :
Tito_Scwrl_2UUB.pdb
: