Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MRDFEELFDKVKPIVMKLRRNY--FVQLWEYDDWIQEGRIVLFRLLE-----EHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMP--YEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD--------------------------------------------------------------- |
| 2YFA Chain:A ((18-253)) | GSHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKSPENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQV-RIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35435 for 897 contacts (-39.5/contact) +
2D Compatibility (PS) -16937 + (NN) -6379 + (LL) -76
1D Compatibility (HY) 3200 + (ID) 650
Total energy: -56277.0 ( -62.74 by residue)
QMean score : 0.505
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