Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWN-DRENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWD--ELK----FQAKEMYGLPAFPLLYEVSTISKIRA----GF-SYG--QASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATA-GKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
1TQH Chain:A ((15-246)) | --------------------------------------------------------------------------------------GERAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEFLKN-KGYEKIAVAGLSLGGVFSLKLGY-TVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELIADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIESPVKQIKWYEQSGHVITLDQEKDQLHEDIYAFLESLDW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69505 for 1778 contacts (-39.1/contact) +
2D Compatibility (PS) -23221 + (NN) -10129 + (LL) 7860
1D Compatibility (HY) -8000 + (ID) 1700
Total energy: -104695.0 ( -58.88 by residue)
QMean score : 0.450
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