Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKIGIIGVGK-MASAIIQGLKQT---QHDIVISGSCLERSKEIAERLDVTYAESHQSLINQADIIMLGIKPQLFE-KVLLPLDITKP----IISMAAGISLARLSQLTRSDLPLIRIM-PNINAQILQSCTAICYNNHVSDELRQLTKEI-TDSFGSSFDIAETNFDTFTALAGSSPAYIYLFI-EALAKAGVKYGFPKEQALSIVGQTVLASSQNLLQGQNSTSDLIDNICSPGGTTIAGLLDLEKNGLTHSVISAIDATIEKAKKL----- |
| 3TRI Chain:A ((2-273)) | NTSNITFIGGGNMA-RNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVR-AMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIFL-IMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTEQAIKVLESGNLRELFIKALTAAVNRAKELSKTVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141818 for 1852 contacts (-76.6/contact) +
2D Compatibility (PS) -27320 + (NN) -8699 + (LL) 480
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -193707.0 ( -104.59 by residue)
QMean score : 0.442
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