Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFIGLAKQ----GYYDGIIFHRIIPDFMIQGGDPTG-TGMGGESIYGESFEDEFSEELYNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVETGSQDKPLEDVVILTIEVKE |
3EOV Chain:B ((26-167)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSI-FHRVIQNFMIQGGDFTNFDGTGGKSIYGEKFADE-NLNVKHFVGALSMANAGPNTNGSQFFI---TTAP------------------------TPWLDGRHVVFGKVLD--GMDVVLRIEKTKTNSHDRPVKPVKIVASGEL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -44617 for 1013 contacts (-44.0/contact) +
2D Compatibility (PS) -14703 + (NN) -8917 + (LL) 20728
1D Compatibility (HY) -11600 + (ID) 3750
Total energy: -62859.0 ( -62.05 by residue)
QMean score : 0.542
|
|
|