Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITKFPDQWQDKLTQRQFDDLTDIQNKLFQAITDGDNILGISPTGTGKTLAYLFPTLLKLQPK-KSQQLLILAPNSELAGQIFDVTKEWAEPL-GLTAQLFLSGSSQKRQIERL-KKGPEILIGTAGRVFELVKLKKIKMMNINTIVLDEFDELLGDSQ-YHFVDNIINRVPRDQQMIYISATNKLDNSKLADNTI----TIDLSD---QKLDTIKHYYITVDKRERTDLLRK-FSNIPDFRGLVFFNSLSDLGACEERLQFNRASAVSLASDINIKFRKVILEKFKNHDISLLLGTDLVARGIDIDNLEYVINFDIARDKETYTHRSGRTGRMGKEGCVITFVTHKEELKQLKKYATVAELVLHNQKLHLK |
1XTI Chain:A ((16-374)) | -----KPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEID |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -196626 for 2803 contacts (-70.1/contact) +
2D Compatibility (PS) -37646 + (NN) -18477 + (LL) 660
1D Compatibility (HY) -27200 + (ID) 4350
Total energy: -283639.0 ( -101.19 by residue)
QMean score : 0.572
|
|
|